Selected Publications

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Selected Publications

 

Prof. Eran Bachrach
  • "Leveraging the cell lineage to predict cell-type specificity of regulatory variation from bulk genomics" - Read Article >>
  • "Constitutive low expression of antiviral effectors sensitizes melanoma cells to a novel oncolytic virus" - Read Article >>
  • "Modeling SARS-CoV-2 Infection in Mice Using Lentiviral hACE2 Vectors Infers Two Modes of Immune Responses to SARS-CoV-2 Infection" - Read Article >>
Prof. Adit Ben-Baruch
  • "Chemotherapy Shifts the Balance in Favor of CD8+ TNFR2+ TILs in Triple-Negative Breast Tumors" - Read Article >>
  • "Continuous Inflammatory Stimulation Leads via Metabolic Plasticity to a Prometastatic Phenotype in Triple-Negative Breast Cancer Cells" - Read Article >>
  • "Persistent Inflammatory Stimulation Drives the Conversion of MSCs to Inflammatory CAFs That Promote Pro-Metastatic Characteristics in Breast Cancer Cells" - Read Article >>
  • "Inflammation-Driven Breast Tumor Cell Plasticity: Stemness/EMT, Therapy Resistance and Dormancy" - Read Article >>
Prof. Itai Benhar
  • "Autoantibodies to Annexin A2 and cerebral thrombosis: Insights from a mouse model" - Read Article >>
  • "Insulin-degrading enzyme higher in subjects with metabolic syndrome" - 
    Read Article >>
  • "Inhibition of Sema-3A Promotes Cell Migration, Axonal Growth, and Retinal Ganglion Cell Survival" - Read Article >>
Prof. Judith Berman
  • "Aneuploidy Underlies Tolerance and Cross-Tolerance to Drugs in Candida parapsilosis" - Read Article >>
  • "Adaptation to Fluconazole via Aneuploidy Enables Cross-Adaptation to Amphotericin B and Flucytosine in Cryptococcus neoformans" - Read Article >>
  • "Tunicamycin Potentiates Antifungal Drug Tolerance via Aneuploidy in Candida albicans" - Read Article >>
  • "A gene coevolution network provides insight into eukaryotic cellular and genomic structure and function" - Read Article >>
  • "Adaptive Resistance Mutations at Suprainhibitory Concentrations Independent of SOS Mutagenesis" - Read Article >>
  • "Multifactorial Mechanisms of Tolerance to Ketoconazole in Candida albicans" -
    Read Article >>
  • "Aspergillus fumigatus and aspergillosis: From basics to clinics" - Read Article >>
  • "The fitness costs and benefits of trisomy of each Candida albicans chromosome" - Read Article >>
  • "Adenosine Triphosphate Released by Candida albicans Is Associated with Reduced Skin Infectivity" - Read Article >>
  • "Combining Miconazole and Domiphen Bromide Results in Excess of Reactive Oxygen Species and Killing of Biofilm Cells" - Read Article >>
  • "Combining Colistin and Fluconazole Synergistically Increases Fungal Membrane Permeability and Antifungal Cidality" - Read Article >>
Prof. Marcelo Ehrlich
  • "Constitutive low expression of antiviral effectors sensitizes melanoma cells to a novel oncolytic virus" - Read Article >>
  • "Modeling SARS-CoV-2 Infection in Mice Using Lentiviral hACE2 Vectors Infers Two Modes of Immune Responses to SARS-CoV-2 Infection" - Read Article >>
Prof. Avigdor Eldar
  • "Short-range quorum sensing controls horizontal gene transfer at micron scale in bacterial communities" - Read Article >>
Prof. Orna Elroy-Stein
  • "The Energy Status of Astrocytes Is the Achilles’ Heel of eIF2B-Leukodystrophy" - Read Article >>
  • "Oligodendrocytes depend on MCL-1 to prevent spontaneous apoptosis and white matter degeneration" - Read Article >>
Prof. Irit Gat-Viks
  • Leveraging the cell lineage to predict cell-type specificity of regulatory variation from bulk genomics - Read Article >>
Prof. Ehud Gazit
  • "Differential effects of putative N-glycosylation sites in human Tau on Alzheimer's disease-related neurodegeneration" - Read Article >>
  • "Inhibition of amyloid fibrillation of γD-crystallin model peptide by the cochineal Carmine" - Read Article >>
  • "Glucosylceramide Associated with Gaucher Disease Forms Amyloid-like Twisted Ribbon Fibrils That Induce α-Synuclein Aggregation" - Read Article >>
  • Inhibitor-Mediated Structural Transition in a Minimal Amyloid Model - Read Article >>
Prof. Martin Kupiec
  • "PCNA Loaders and Unloaders - One Ring That Rules Them All" - Read Article >>
  • "Split Chloramphenicol Acetyl-Transferase Assay Reveals Self-Ubiquitylation-Dependent Regulation of UBE3B" - Read Article >>
  • "The Amazing Acrobat: Yeast's Histone H3K56 Juggles Several Important Roles While Maintaining Perfect Balance" - Read Article >>
  • "Histones on fire: the effect of Dun1 and Mrc1 on origin firing and replication of hyper-acetylated genomes" - Read Article >>
  • "A novel role for Dun1 in the regulation of origin firing upon hyper-acetylation of H3K56" - Read Article >>
  • "DNA damage bypass pathways and their effect on mutagenesis in yeast" - Read Article >>
  • "Noise buffering by biomolecular condensates in glucose sensing" - Read Article >>
Prof. Dan Peer
  • "Principles for designing an optimal mRNA lipid nanoparticle vaccine" - Read Article >>
  • "Cytosolic delivery of nucleic acids: The case of ionizable lipid nanoparticles" - Read Article >>

Prof. Tal Pupko
  • "A Probabilistic Model for Indel Evolution: Differentiating Insertions from Deletions" - Read Article >>
  • "Motifier: An IgOme Profiler Based on Peptide Motifs Using Machine Learning" -
    Read Article >>
  • "A phage mechanism for selective nicking of dUMP-containing DNA" -
    Read Article >>
  • "Harnessing machine learning to guide phylogenetic-tree search algorithms" -
    Read Article >>
  • "Type III secretion system effectors form robust and flexible intracellular virulence networks" - Read Article >>
  • "PASA: Proteomic analysis of serum antibodies web server"  - Read Article >>
  • "Harnessing Machine Learning To Unravel Protein Degradation in Escherichia coli" - Read Article >>
  • "Domain-Scan: Combinatorial Sero-Diagnosis of Infectious Diseases Using Machine Learning" - Read Article >>
Prof. Aldema Sas-Chen
  • "Quantitative nucleotide resolution profiling of RNA cytidine acetylation by ac4C-seq" - Read Article >>
  • "Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing" - Read Article >>
  • "mito-Ψ-Seq: A High-Throughput Method for Systematic Mapping of Pseudouridine Within Mitochondrial RNA" - Read Article >>
Prof. Gil Segal
  • "A horizontally acquired Legionella genomic island encoding a LuxR type regulator and effector proteins displays variation in gene content and regulation" - Read Article >>
Prof. Adi Stern
  • "Evidence for increased breakthrough rates of SARS-CoV-2 variants of concern in BNT162b2-mRNA-vaccinated individuals" - Read Article >>
  • "Unraveling a Nosocomial Outbreak of COVID-19: The Role of Whole-Genome Sequence Analysis" -
    Read Article >> 
Prof. Mia Horowitz
  • "The Uncovered Function of the Drosophila GBA1a-Encoded Protein" - Read Article >>
Prof. Daniel Segal
  • "Differential effects of putative N-glycosylation sites in human Tau on Alzheimer's disease-related neurodegeneration" - Read Article >

  • "Inhibition of amyloid fibrillation of γD-crystallin model peptide by the cochineal Carmine" - Read Article >>
  • "Glucosylceramide Associated with Gaucher Disease Forms Amyloid-like Twisted Ribbon Fibrils That Induce α-Synuclein Aggregation" - Read Article >>
  • Inhibitor-Mediated Structural Transition in a Minimal Amyloid Model - Read Article >>
Prof. Isaac P. Witz
  • "Constitutive low expression of antiviral effectors sensitizes melanoma cells to a novel oncolytic virus" - Read Article >>
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